EnhancerDB
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  3. rs139580366[chr17:60895263]
Enhancers that have rs139580366[chr17:60895263]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 60893841 60907875 enh17280
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Placenta Pancreas (Panc1) Muscle (Myoblast) Pancreas Spleen Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs139580366[chr17:60895263]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 60894845 60895398 ZNF143 GTRD no Epithelial (MCF-7) 21778125
chr17 60895249 60895263 POU1F1 JASPAR yes 55214543
chr17 60895254 60895264 GSX2 JASPAR yes 55214544
chr17 60895255 60895263 BSX JASPAR yes 55214545
chr17 60895255 60895264 VENTX JASPAR yes 55214546
chr17 60895262 60895283 IRF1 JASPAR yes 55214547
Genes associated with rs139580366[chr17:60895263], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More