EnhancerDB
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  3. rs139602432[chr1:54778105]
Enhancers that have rs139602432[chr1:54778105]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54761072 54782679 enh11866
Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs139602432[chr1:54778105]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54778095 54778105 HOXA13 JASPAR yes 28972014
chr1 54778095 54778110 MEF2C JASPAR yes 28972015
chr1 54778096 54778111 MEF2A JASPAR yes 28972016
chr1 54778097 54778109 MEF2A JASPAR yes 28972017
chr1 54778098 54778108 MEF2A JASPAR yes 28972018
chr1 54778101 54778115 POU1F1 JASPAR yes 28972019
chr1 54778105 54778109 TEAD2 TRANSFAC yes 28972020
chr1 54778105 54778110 TBP TRANSFAC yes 28972021
chr1 54778105 54778111 TMF TRANSFAC yes 28972022
Genes associated with rs139602432[chr1:54778105], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More