EnhancerDB
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  3. rs139610590[chr12:54828072]
Enhancers that have rs139610590[chr12:54828072]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54815065 54835675 enh14748
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs139610590[chr12:54828072]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54827985 54828331 ZNF143 GTRD no Epithelial (MCF-7) 21550614
chr12 54828067 54828077 SREBF1 JASPAR yes 121041940
chr12 54828067 54828077 SREBF2 JASPAR yes 121041941
Genes associated with rs139610590[chr12:54828072], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 54762917 54785082 - ZNF385A ENSG00000161642.13 54785082 42990 Esophagus 0.262739 12150