EnhancerDB
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  3. rs139613901[chr12:50987296]
Enhancers that have rs139613901[chr12:50987296]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50971777 51003055 enh2348
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs139613901[chr12:50987296]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50987285 50987300 FOXP1 JASPAR yes 120849011
chr12 50987286 50987307 IRF1 JASPAR yes 120849012
chr12 50987287 50987302 FOXP1 JASPAR yes 120849013
chr12 50987287 50987308 IRF1 JASPAR yes 120849014
chr12 50987288 50987303 FOXP1 JASPAR yes 120849015
chr12 50987288 50987309 IRF1 JASPAR yes 120849016
chr12 50987289 50987304 FOXP1 JASPAR yes 120849017
chr12 50987290 50987305 FOXP1 JASPAR yes 120849018
chr12 50987292 50987313 IRF1 JASPAR yes 120849019
chr12 50987293 50987314 IRF1 JASPAR yes 120849020
chr12 50987296 50987310 SPIC JASPAR yes 120849021
Genes associated with rs139613901[chr12:50987296], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More