EnhancerDB
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  3. rs139623380[chr12:105855004]
Enhancers that have rs139623380[chr12:105855004]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 105835665 105865198 enh29945
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Astrocyte Bone (Osteoblast) Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs139623380[chr12:105855004]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 105854998 105855008 ALX3 JASPAR yes 123446115
chr12 105854998 105855008 GSX1 JASPAR yes 123446116
chr12 105854998 105855008 GSX2 JASPAR yes 123446117
chr12 105854998 105855008 LHX6 JASPAR yes 123446118
chr12 105854998 105855008 MIXL1 JASPAR yes 123446119
chr12 105854998 105855008 MNX1 JASPAR yes 123446120
chr12 105854998 105855008 NOTO JASPAR yes 123446121
chr12 105854998 105855008 POU6F1 JASPAR yes 123446122
chr12 105854998 105855008 RAX JASPAR yes 123446123
chr12 105854999 105855007 ISX JASPAR yes 123446124
chr12 105854999 105855007 LMX1A JASPAR yes 123446125
chr12 105854999 105855007 LMX1B JASPAR yes 123446126
chr12 105854999 105855007 NKX6-1 JASPAR yes 123446127
chr12 105854999 105855007 NKX6-2 JASPAR yes 123446128
chr12 105854999 105855007 PRRX1 JASPAR yes 123446129
chr12 105854999 105855007 RAX2 JASPAR yes 123446130
chr12 105854999 105855007 SHOX JASPAR yes 123446131
chr12 105854999 105855007 UNCX JASPAR yes 123446132
chr12 105854999 105855007 VAX1 JASPAR yes 123446133
Genes associated with rs139623380[chr12:105855004], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More