EnhancerDB
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  3. rs139688007[chr17:49018909]
Enhancers that have rs139688007[chr17:49018909]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49015225 49039275 enh17224
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs139688007[chr17:49018909]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49017994 49019671 ZNF274 GTRD no Liver (HepG2) 21771413
chr17 49018569 49019246 ZNF274 GTRD no Liver (HepG2) 21771417
chr17 49018662 49019282 ZNF274 GTRD no Liver (HepG2) 21771418
chr17 49018688 49019225 ZNF274 GTRD no Liver (HepG2) 21771419
chr17 49018724 49019228 ZNF274 GTRD no Liver (HepG2) 21771420
chr17 49018739 49019147 ZNF274 GTRD no Liver (HepG2) 21771421
chr17 49018752 49019455 ZNF274 GTRD no Liver (HepG2) 21771422
chr17 49018755 49019413 ZNF274 GTRD no Bone Marrow (K562) 21771423
chr17 49018837 49019382 ZNF274 GTRD no Bone Marrow (K562) 21771424
chr17 49018901 49018911 ID4 JASPAR yes 54736909
chr17 49018901 49018911 TCF3 JASPAR yes 54736910
chr17 49018901 49018911 TCF4 JASPAR yes 54736911
chr17 49018902 49018911 SNAI2 JASPAR yes 54736912
Genes associated with rs139688007[chr17:49018909], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More