EnhancerDB
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  3. rs139692878[chr1:116899428]
Enhancers that have rs139692878[chr1:116899428]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116881229 116905675 enh581
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Astrocyte Stomach Muscle (A673) Thyroid Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs139692878[chr1:116899428]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116899328 116899664 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21332322
chr1 116899412 116899432 ESR1 JASPAR yes 31800224
chr1 116899416 116899434 ESR2 JASPAR yes 31800225
chr1 116899417 116899432 ESR2 JASPAR yes 31800226
chr1 116899419 116899434 NR2C2 JASPAR yes 31800227
chr1 116899422 116899435 NR2F1 JASPAR yes 31800228
chr1 116899424 116899435 ESRRA JASPAR yes 31800229
chr1 116899425 116899433 NR4A2 JASPAR yes 31800230
chr1 116899426 116899440 RXRB JASPAR yes 31800231
chr1 116899426 116899440 RXRG JASPAR yes 31800232
chr1 116899426 116899441 HNF4G JASPAR yes 31800233
chr1 116899426 116899441 NR2C2 JASPAR yes 31800234
chr1 116899427 116899442 PRDM1 JASPAR yes 31800235
Genes associated with rs139692878[chr1:116899428], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More