EnhancerDB
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  3. rs139696920[chr15:55567700]
Enhancers that have rs139696920[chr15:55567700]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 55567262 55578776 enh31390
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Astrocyte Blood (GM12878) Stomach Colon (HCT116) Breast Uterus Peripheral Blood (MM.1S) Adrenal Lung (PC-9) Pancreas Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs139696920[chr15:55567700]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 55567694 55567704 ID4 JASPAR yes 23498098
chr15 55567694 55567704 TCF3 JASPAR yes 23498099
chr15 55567694 55567704 TCF4 JASPAR yes 23498100
chr15 55567695 55567704 SNAI2 JASPAR yes 23498101
chr15 55567696 55567701 USF2 TRANSFAC yes 23498102
chr15 55567700 55567716 RFX2 JASPAR yes 23498103
chr15 55567700 55567716 RFX3 JASPAR yes 23498104
chr15 55567700 55567716 RFX4 JASPAR yes 23498105
Genes associated with rs139696920[chr15:55567700], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More