EnhancerDB
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  3. rs139697840[chr1:234793839]
Enhancers that have rs139697840[chr1:234793839]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234788925 234800115 enh12793
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs139697840[chr1:234793839]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234792446 234794176 POLR2A UCSC Txn Factor no Conserved 107881373
chr1 234792446 234794176 POLR2A UCSC Txn Factor no Conserved 107881374
chr1 234793733 234794383 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395580
chr1 234793733 234794383 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107881412
chr1 234793800 234794276 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395581
chr1 234793800 234794276 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107881413
chr1 234793811 234794251 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21395582
chr1 234793811 234794251 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107881414
chr1 234793814 234794170 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395583
chr1 234793814 234794170 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107881415
chr1 234793815 234794325 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395584
chr1 234793815 234794325 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107881416
chr1 234793832 234793844 PROX1 JASPAR yes 36299678
chr1 234793838 234794234 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395585
chr1 234793838 234794234 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107881417
Genes associated with rs139697840[chr1:234793839], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More