EnhancerDB
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  3. rs139698583[chr16:87880570]
Enhancers that have rs139698583[chr16:87880570]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87873744 87902035 enh4182
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs139698583[chr16:87880570]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87877016 87882827 POLR2A UCSC Txn Factor no Conserved 108221239
chr16 87879168 87880759 ZNF274 GTRD no Liver (HepG2) 21735194
chr16 87879168 87880759 ZNF274 GTRD no Liver (HepG2) 108221257
chr16 87880559 87880571 TFAP2A JASPAR yes 12246513
chr16 87880564 87880571 SP1 TRANSFAC yes 12246515
chr16 87880565 87880576 E2F1 JASPAR yes 12246516
chr16 87880566 87880571 SP1 TRANSFAC yes 12246517
chr16 87880566 87880577 E2F4 JASPAR yes 12246518
chr16 87880568 87880576 E2F1 JASPAR yes 12246519
Genes associated with rs139698583[chr16:87880570], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More