EnhancerDB
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  3. rs139717949[chr16:14471998]
Enhancers that have rs139717949[chr16:14471998]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 14436207 14505799 enh3905
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs139717949[chr16:14471998]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 14471897 14472341 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108184049
chr16 14471969 14472539 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21692869
chr16 14471969 14472539 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108184050
chr16 14471997 14472001 LFA1 TRANSFAC yes 9691131
Genes associated with rs139717949[chr16:14471998], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More