EnhancerDB
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  3. rs139740204[chr11:65239455]
Enhancers that have rs139740204[chr11:65239455]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 65232865 65270235 enh1826
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139740204[chr11:65239455]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 65238694 65240048 POLR2A UCSC Txn Factor no Conserved 107978440
chr11 65238694 65240048 POLR2A UCSC Txn Factor no Conserved 107978441
chr11 65238743 65240031 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21493182
chr11 65238743 65240031 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107978443
chr11 65238743 65240031 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107978444
chr11 65238910 65239570 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21493212
chr11 65238910 65239570 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107978479
chr11 65238910 65239570 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107978480
chr11 65239122 65239626 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21493231
chr11 65239122 65239626 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107978501
chr11 65239137 65239661 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21493232
chr11 65239137 65239661 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107978502
chr11 65239213 65239841 TCF7L2 GTRD no Colon (HCT116) 21493233
chr11 65239213 65239841 TCF7L2 GTRD no Colon (HCT116) 107978503
chr11 65239264 65239948 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21493234
chr11 65239264 65239948 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107978504
chr11 65239323 65239899 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21493235
chr11 65239323 65239899 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107978505
chr11 65239345 65239949 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21493236
chr11 65239345 65239949 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107978506
chr11 65239349 65239609 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21493237
chr11 65239349 65239609 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107978507
chr11 65239365 65239729 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21493238
chr11 65239365 65239729 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107978508
chr11 65239371 65239871 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21493239
chr11 65239371 65239871 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107978509
chr11 65239390 65239852 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21493240
chr11 65239390 65239852 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107978510
chr11 65239401 65239897 TCF7L2 GTRD no Colon (HCT116) 21493241
chr11 65239401 65239897 TCF7L2 GTRD no Colon (HCT116) 107978511
chr11 65239402 65239831 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21493242
chr11 65239402 65239831 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107978512
chr11 65239404 65239604 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21493243
chr11 65239404 65239604 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107978513
chr11 65239404 65239668 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107978514
chr11 65239426 65239702 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21493244
chr11 65239426 65239702 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107978515
chr11 65239429 65239865 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21493245
chr11 65239429 65239865 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107978516
chr11 65239441 65239828 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21493246
chr11 65239441 65239828 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107978517
chr11 65239455 65240051 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21493247
chr11 65239455 65240051 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107978518
Genes associated with rs139740204[chr11:65239455], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr11 64879317 64883856 + TM7SF2 ENSG00000149809.10 64879317 355599 Esophagus 0.0291204 11056