EnhancerDB
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  3. rs139750940[chr1:16496398]
Enhancers that have rs139750940[chr1:16496398]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139750940[chr1:16496398]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16496389 16496409 TP63 JASPAR yes 27030664
chr1 16496390 16496408 TP53 JASPAR yes 27030665
chr1 16496390 16496408 TP73 JASPAR yes 27030666
chr1 16496394 16496415 REST JASPAR yes 27030667
Genes associated with rs139750940[chr1:16496398], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More