EnhancerDB
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  3. rs139776715[chr17:48293858]
Enhancers that have rs139776715[chr17:48293858]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48279381 48302635 enh17216
Bone Marrow (K562) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Uterus Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139776715[chr17:48293858]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48293413 48294763 ZBTB33 GTRD no Lung (A549) 21769663
chr17 48293413 48294763 ZBTB33 GTRD no Lung (A549) 108270692
chr17 48293531 48294658 ZBTB33 GTRD no Lung (A549) 21769664
chr17 48293531 48294658 ZBTB33 GTRD no Lung (A549) 108270693
chr17 48293622 48294621 ZNF274 GTRD no Bone Marrow (K562) 21769665
chr17 48293622 48294621 ZNF274 GTRD no Bone Marrow (K562) 108270694
chr17 48293720 48294665 ZNF143 GTRD no Epithelial (MCF-7) 108270695
chr17 48293729 48294568 ZNF274 GTRD no Bone Marrow (K562) 21769666
chr17 48293729 48294568 ZNF274 GTRD no Bone Marrow (K562) 108270696
chr17 48293797 48294459 ZNF143 GTRD no Epithelial (MCF-7) 108270697
chr17 48293809 48294463 ZBTB33 GTRD no Lung (A549) 21769667
chr17 48293809 48294463 ZBTB33 GTRD no Lung (A549) 108270698
chr17 48293827 48294505 ZNF274 GTRD no Bone Marrow (K562) 21769668
chr17 48293827 48294505 ZNF274 GTRD no Bone Marrow (K562) 108270699
chr17 48293855 48293861 SOX10 JASPAR yes 54688096
Genes associated with rs139776715[chr17:48293858], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More