EnhancerDB
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  3. rs139788546[chr1:232768394]
Enhancers that have rs139788546[chr1:232768394]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
Transcript factors that have rs139788546[chr1:232768394]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232768387 232768401 FOXF2 JASPAR yes 36179950
chr1 232768388 232768399 FOXA1 JASPAR yes 36179951
chr1 232768388 232768403 FOXA1 JASPAR yes 36179952
chr1 232768389 232768400 FOXB1 JASPAR yes 36179953
chr1 232768389 232768400 FOXC1 JASPAR yes 36179954
chr1 232768389 232768401 FOXC2 JASPAR yes 36179955
chr1 232768394 232768406 FOXI1 JASPAR yes 36179956
Genes associated with rs139788546[chr1:232768394], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More