EnhancerDB
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  3. rs139790679[chr16:25062873]
Enhancers that have rs139790679[chr16:25062873]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 25036065 25069195 enh3955
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
chr16 25062814 25063119 vista22214
VISTA
Transcript factors that have rs139790679[chr16:25062873]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 25062695 25063051 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21700079
chr16 25062695 25063051 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108189707
chr16 25062749 25063133 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21700080
chr16 25062749 25063133 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108189708
chr16 25062785 25063834 ZNF274 GTRD no Blood (GM12878) 21700081
chr16 25062785 25063834 ZNF274 GTRD no Blood (GM12878) 108189709
chr16 25062791 25063381 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21700082
chr16 25062791 25063381 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108189710
chr16 25062831 25062969 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21700083
chr16 25062831 25062969 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108189711
chr16 25062843 25063712 ZNF274 GTRD no Blood (GM12878) 21700084
chr16 25062843 25063712 ZNF274 GTRD no Blood (GM12878) 108189712
chr16 25062861 25062874 NFKB1 JASPAR yes 10100200
chr16 25062861 25062874 NFKB2 JASPAR yes 10100201
chr16 25062861 25062874 NFKB1 JASPAR yes 49358638
chr16 25062861 25062874 NFKB2 JASPAR yes 49358639
chr16 25062862 25062873 NFKB1 JASPAR yes 10100202
chr16 25062862 25062873 NFKB1 JASPAR yes 49358640
chr16 25062866 25064366 ZNF274 GTRD no Blood (GM12878) 21700085
chr16 25062866 25064366 ZNF274 GTRD no Blood (GM12878) 108189713
chr16 25062868 25063104 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21700086
chr16 25062868 25063104 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108189714
Genes associated with rs139790679[chr16:25062873], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More