EnhancerDB
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  3. rs139797872[chr17:59417994]
Enhancers that have rs139797872[chr17:59417994]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59383635 59420035 enh17269
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs139797872[chr17:59417994]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59417979 59417994 ZIC3 JASPAR yes 55150822
chr17 59417979 59417994 ZIC4 JASPAR yes 55150823
chr17 59417980 59417994 ZIC1 JASPAR yes 55150824
chr17 59417986 59418007 ZNF263 JASPAR yes 55150825
chr17 59417987 59417997 SP1 JASPAR yes 55150826
Genes associated with rs139797872[chr17:59417994], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More