EnhancerDB
  1. Home
  2. SNP
  3. rs139808909[chr17:60162671]
Enhancers that have rs139808909[chr17:60162671]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 60161225 60181195 enh32257
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Stomach
Transcript factors that have rs139808909[chr17:60162671]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 60159781 60164099 TCF7L2 GTRD no Colon (HCT116) 21777616
chr17 60160387 60163862 TCF7L2 GTRD no Colon (HCT116) 21777617
chr17 60160644 60163898 TCF7L2 GTRD no Colon (HCT116) 21777618
chr17 60161091 60163986 TCF7L2 GTRD no Colon (HCT116) 21777619
chr17 60162504 60163628 TCF7L2 GTRD no Colon (HCT116) 21777629
chr17 60162535 60163354 TCF7L2 GTRD no Colon (HCT116) 21777630
chr17 60162652 60162672 ESR1 JASPAR yes 55180145
chr17 60162656 60162674 NR3C1 JASPAR yes 55180146
chr17 60162670 60162682 YY1 JASPAR yes 55180147
Genes associated with rs139808909[chr17:60162671], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More