EnhancerDB
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  3. rs139825978[chr1:201732109]
Enhancers that have rs139825978[chr1:201732109]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201710292 201749335 enh12527
Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Heart
Transcript factors that have rs139825978[chr1:201732109]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201732101 201732122 IRF1 JASPAR yes 34530334
chr1 201732104 201732118 IRF7 JASPAR yes 34530335
chr1 201732105 201732120 PRDM1 JASPAR yes 34530336
chr1 201732107 201732122 FOXP1 JASPAR yes 34530337
chr1 201732107 201732128 IRF1 JASPAR yes 34530338
chr1 201732108 201732123 FOXP1 JASPAR yes 34530339
Genes associated with rs139825978[chr1:201732109], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More