EnhancerDB
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  3. rs139833272[chr1:178025887]
Enhancers that have rs139833272[chr1:178025887]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178015665 178033840 enh12406
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Lung (PC-9) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs139833272[chr1:178025887]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178025881 178025892 FOXA1 JASPAR yes 33390350
chr1 178025882 178025889 SPIB JASPAR yes 33390351
chr1 178025883 178026389 TCF7L2 GTRD no Colon (HCT116) 21352421
Genes associated with rs139833272[chr1:178025887], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More