EnhancerDB
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  3. rs139834960[chr12:46859838]
Enhancers that have rs139834960[chr12:46859838]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46859389 46872155 enh14677
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs139834960[chr12:46859838]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46859826 46859847 IRF1 JASPAR yes 120624914
chr12 46859835 46859849 SPI1 JASPAR yes 120624915
Genes associated with rs139834960[chr12:46859838], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More