EnhancerDB
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  3. rs139852847[chr2:217397822]
Enhancers that have rs139852847[chr2:217397822]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 217395170 217407835 enh19216
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139852847[chr2:217397822]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 217397815 217397827 TFAP2A JASPAR yes 80858583
chr2 217397815 217397827 TFAP2B JASPAR yes 80858584
chr2 217397815 217397827 TFAP2C JASPAR yes 80858585
chr2 217397816 217397827 TFAP2A JASPAR yes 80858586
chr2 217397816 217397827 TFAP2B JASPAR yes 80858587
chr2 217397816 217397827 TFAP2C JASPAR yes 80858588
chr2 217397816 217397830 PLAG1 JASPAR yes 80858589
chr2 217397817 217397826 TFAP2A JASPAR yes 80858590
Genes associated with rs139852847[chr2:217397822], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More