EnhancerDB
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  3. rs139853382[chr15:55574858]
Enhancers that have rs139853382[chr15:55574858]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 55567262 55578776 enh31390
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Astrocyte Blood (GM12878) Stomach Colon (HCT116) Breast Uterus Peripheral Blood (MM.1S) Adrenal Lung (PC-9) Pancreas Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
chr15 55574844 55574949 vista20049
VISTA
Transcript factors that have rs139853382[chr15:55574858]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 55574375 55574891 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21654646
chr15 55574375 55574891 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108139868
chr15 55574424 55574974 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21654647
chr15 55574424 55574974 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108139869
chr15 55574448 55574904 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21654648
chr15 55574448 55574904 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108139870
chr15 55574839 55575103 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21654650
chr15 55574839 55575103 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108139872
chr15 55574855 55574867 HNF1B JASPAR yes 23499318
chr15 55574855 55574867 HNF1B JASPAR yes 70527808
Genes associated with rs139853382[chr15:55574858], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More