EnhancerDB
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  3. rs139869943[chr2:232471357]
Enhancers that have rs139869943[chr2:232471357]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232460065 232495135 enh6201
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs139869943[chr2:232471357]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232471345 232471366 IRF1 JASPAR yes 81725001
chr2 232471346 232471361 FOXP1 JASPAR yes 81725002
chr2 232471346 232471367 IRF1 JASPAR yes 81725003
chr2 232471347 232471368 IRF1 JASPAR yes 81725004
chr2 232471351 232471366 FOXP1 JASPAR yes 81725005
chr2 232471351 232471372 IRF1 JASPAR yes 81725006
chr2 232471352 232471367 FOXP1 JASPAR yes 81725007
chr2 232471352 232471373 IRF1 JASPAR yes 81725008
Genes associated with rs139869943[chr2:232471357], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More