EnhancerDB
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  3. rs139897110[chr12:65028747]
Enhancers that have rs139897110[chr12:65028747]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65008245 65038815 enh2404
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs139897110[chr12:65028747]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65028726 65028747 IRF1 JASPAR yes 121418835
chr12 65028731 65028752 IRF1 JASPAR yes 121418838
chr12 65028732 65028747 FOXP1 JASPAR yes 121418839
chr12 65028732 65028753 IRF1 JASPAR yes 121418840
chr12 65028733 65028748 STAT2 JASPAR yes 121418841
chr12 65028736 65028757 IRF1 JASPAR yes 121418842
chr12 65028737 65028752 FOXP1 JASPAR yes 121418843
chr12 65028737 65028758 IRF1 JASPAR yes 121418844
chr12 65028741 65028762 IRF1 JASPAR yes 121418845
chr12 65028742 65028757 FOXP1 JASPAR yes 121418846
chr12 65028742 65028763 IRF1 JASPAR yes 121418847
chr12 65028743 65028764 IRF1 JASPAR yes 121418848
chr12 65028744 65028759 FOXP1 JASPAR yes 121418849
chr12 65028746 65028761 FOXP1 JASPAR yes 121418850
chr12 65028747 65028762 FOXP1 JASPAR yes 121418851
Genes associated with rs139897110[chr12:65028747], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More