EnhancerDB
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  3. rs139914249[chr12:52531913]
Enhancers that have rs139914249[chr12:52531913]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs139914249[chr12:52531913]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52531458 52531962 TCF7L2 GTRD no Colon (HCT116) 21546278
chr12 52531906 52531921 ZIC3 JASPAR yes 120920565
chr12 52531906 52531921 ZIC4 JASPAR yes 120920566
chr12 52531909 52531929 ESR1 JASPAR yes 120920567
Genes associated with rs139914249[chr12:52531913], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More