EnhancerDB
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  3. rs139920545[chr6:25015560]
Enhancers that have rs139920545[chr6:25015560]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 24994525 25030795 enh9006
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs139920545[chr6:25015560]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25015560 25015564 H1TF2 TRANSFAC yes 100813896
chr6 25015560 25015564 NFE TRANSFAC yes 100813897
chr6 25015560 25015564 SRF TRANSFAC yes 100813898
Genes associated with rs139920545[chr6:25015560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More