EnhancerDB
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  3. rs139927027[chr17:29920932]
Enhancers that have rs139927027[chr17:29920932]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 29918764 29929790 enh17097
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Lung (A549) Stomach Placenta Pancreas (Panc1) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Uterus Heart
chr17 29920789 29921150 vista24411
VISTA
Transcript factors that have rs139927027[chr17:29920932]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 29920784 29921314 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21750198
chr17 29920784 29921314 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108249676
chr17 29920800 29921316 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21750199
chr17 29920800 29921316 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108249677
chr17 29920921 29920933 FOXI1 JASPAR yes 21219069
chr17 29920921 29920933 FOXI1 JASPAR yes 53848847
chr17 29920929 29920934 GATA2 JASPAR yes 21219070
chr17 29920929 29920934 GATA2 JASPAR yes 53848848
Genes associated with rs139927027[chr17:29920932], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More