EnhancerDB
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  3. rs139932933[chr17:2856633]
Enhancers that have rs139932933[chr17:2856633]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2849745 2866995 enh4215
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs139932933[chr17:2856633]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2856619 2856635 RFX4 JASPAR yes 52789104
chr17 2856629 2856642 ZBTB18 JASPAR yes 52789105
chr17 2856630 2856642 PKNOX1 JASPAR yes 52789106
chr17 2856630 2856642 TGIF1 JASPAR yes 52789107
chr17 2856631 2856640 SNAI2 JASPAR yes 52789108
chr17 2856631 2856641 FIGLA JASPAR yes 52789109
chr17 2856631 2856641 ID4 JASPAR yes 52789110
chr17 2856631 2856641 TCF3 JASPAR yes 52789111
chr17 2856631 2856641 TCF4 JASPAR yes 52789112
chr17 2856633 2856642 ZEB1 JASPAR yes 52789113
chr17 2856633 2856643 TBX21 JASPAR yes 52789114
chr17 2856633 2856644 TBX20 JASPAR yes 52789115
chr17 2856633 2856644 TBX2 JASPAR yes 52789116
chr17 2856633 2856646 EOMES JASPAR yes 52789117
Genes associated with rs139932933[chr17:2856633], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More