EnhancerDB
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  3. rs139941448[chr16:85360603]
Enhancers that have rs139941448[chr16:85360603]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139941448[chr16:85360603]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85358142 85360796 TCF7L2 GTRD no Colon (HCT116) 21723552
chr16 85358251 85360720 TCF7L2 GTRD no Colon (HCT116) 21723553
chr16 85358967 85360905 TCF7L2 GTRD no Colon (HCT116) 21723590
chr16 85360052 85360663 TCF7L2 GTRD no Colon (HCT116) 21723637
chr16 85360068 85360786 TCF7L2 GTRD no Colon (HCT116) 21723638
chr16 85360070 85362286 ZNF143 GTRD no Epithelial (MCF-7) 21723639
chr16 85360090 85362310 ZNF143 GTRD no Epithelial (MCF-7) 21723640
chr16 85360095 85360834 TCF7L2 GTRD no Colon (HCT116) 21723641
chr16 85360101 85362374 ZNF143 GTRD no Epithelial (MCF-7) 21723642
chr16 85360125 85360943 TCF7L2 GTRD no Colon (HCT116) 21723643
chr16 85360215 85360763 TCF7L2 GTRD no Colon (HCT116) 21723644
chr16 85360224 85360897 ERG GTRD no Prostate (RWPE1) 21723645
chr16 85360256 85361002 ZBTB33 GTRD no Brain (SK-N-SH) 21723646
chr16 85360290 85360735 TCF7L2 GTRD no Colon (HCT116) 21723647
chr16 85360387 85360827 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723648
chr16 85360572 85361116 ZNF143 GTRD no Epithelial (MCF-7) 21723649
chr16 85360591 85360610 PAX5 JASPAR yes 12047901
chr16 85360596 85360609 TFAP2A JASPAR yes 12047903
chr16 85360596 85360609 TFAP2B JASPAR yes 12047904
chr16 85360596 85360609 TFAP2C JASPAR yes 12047905
chr16 85360597 85360611 PLAG1 JASPAR yes 12047906
Genes associated with rs139941448[chr16:85360603], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More