EnhancerDB
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  3. rs139950752[chr1:116899000]
Enhancers that have rs139950752[chr1:116899000]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116881229 116905675 enh581
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Astrocyte Stomach Muscle (A673) Thyroid Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs139950752[chr1:116899000]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116898732 116899068 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21332320
chr1 116898963 116899299 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21332321
chr1 116898979 116899000 ZNF263 JASPAR yes 31800107
chr1 116898982 116899003 ZNF263 JASPAR yes 31800110
chr1 116898983 116899004 ZNF263 JASPAR yes 31800112
chr1 116898986 116899007 ZNF263 JASPAR yes 31800115
chr1 116898987 116899008 ZNF263 JASPAR yes 31800117
chr1 116898989 116899000 E2F6 JASPAR yes 31800119
chr1 116898990 116899011 ZNF263 JASPAR yes 31800120
chr1 116898991 116899012 ZNF263 JASPAR yes 31800121
chr1 116898994 116899000 PEA3 TRANSFAC yes 31800122
chr1 116898994 116899015 ZNF263 JASPAR yes 31800123
chr1 116898995 116899003 EHF JASPAR yes 31800124
chr1 116898999 116899004 ETS2 TRANSFAC yes 31800125
chr1 116898999 116899007 EHF JASPAR yes 31800126
Genes associated with rs139950752[chr1:116899000], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More