EnhancerDB
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  3. rs139978520[chr6:25360333]
Enhancers that have rs139978520[chr6:25360333]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25357285 25373535 enh38931
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Thyroid Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs139978520[chr6:25360333]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25360316 25360337 ZNF263 JASPAR yes 100851061
chr6 25360327 25360336 SNAI2 JASPAR yes 100851063
chr6 25360327 25360337 ID4 JASPAR yes 100851064
chr6 25360327 25360337 NHLH1 JASPAR yes 100851065
chr6 25360327 25360337 TCF3 JASPAR yes 100851066
chr6 25360327 25360337 TCF4 JASPAR yes 100851067
chr6 25360329 25360338 ZEB1 JASPAR yes 100851068
chr6 25360330 25360338 TBX5 JASPAR yes 100851069
Genes associated with rs139978520[chr6:25360333], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More