EnhancerDB
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  3. rs139978538[chr1:109784424]
Enhancers that have rs139978538[chr1:109784424]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 109778260 109787295 enh27060
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Ovary Blood (T-cell) Esophagus Astrocyte Stomach Muscle (A673) Uterus Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Thymus Heart
chr1 109784080 109784425 vista2844
VISTA
Transcript factors that have rs139978538[chr1:109784424]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 109782710 109784650 ZBTB33 GTRD no Lung (A549) 107819071
chr1 109784407 109784428 ZNF263 JASPAR yes 31418958
chr1 109784407 109784428 ZNF263 JASPAR yes 118346524
chr1 109784410 109784431 ZNF263 JASPAR yes 31418960
chr1 109784410 109784431 ZNF263 JASPAR yes 118346526
chr1 109784412 109784427 FOXP1 JASPAR yes 31418961
chr1 109784412 109784427 FOXP1 JASPAR yes 118346527
Genes associated with rs139978538[chr1:109784424], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More