EnhancerDB
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  3. rs139980257[chr2:39635780]
Enhancers that have rs139980257[chr2:39635780]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39624677 39646761 enh18467
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Liver Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs139980257[chr2:39635780]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39635778 39635793 FOXP1 JASPAR yes 73197645
chr2 39635779 39635794 FOXP1 JASPAR yes 73197646
chr2 39635779 39635800 IRF1 JASPAR yes 73197647
chr2 39635780 39635795 FOXP1 JASPAR yes 73197648
Genes associated with rs139980257[chr2:39635780], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More