EnhancerDB
  1. Home
  2. SNP
  3. rs139980721[chr1:208412801]
Enhancers that have rs139980721[chr1:208412801]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 208372373 208415646 enh12613
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs139980721[chr1:208412801]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 208412650 208412926 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374956
chr1 208412650 208412926 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107865552
chr1 208412789 208412801 PKNOX1 JASPAR yes 34910953
chr1 208412789 208412801 PKNOX2 JASPAR yes 34910954
chr1 208412789 208412801 TGIF1 JASPAR yes 34910955
chr1 208412789 208412801 TGIF2 JASPAR yes 34910956
chr1 208412798 208412808 NFATC3 JASPAR yes 34910958
Genes associated with rs139980721[chr1:208412801], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More