EnhancerDB
  1. Home
  2. SNP
  3. rs139988345[chr3:149113066]
Enhancers that have rs139988345[chr3:149113066]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 149097815 149115835 enh21019
Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Heart
Transcript factors that have rs139988345[chr3:149113066]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 149113058 149113068 RORA JASPAR yes 6490401
chr3 149113059 149113072 NR2F1 JASPAR yes 6490402
chr3 149113062 149113073 CDX2 JASPAR yes 6490403
chr3 149113063 149113067 ESR1 TRANSFAC yes 6490404
chr3 149113063 149113074 HOXA10 JASPAR yes 6490405
chr3 149113063 149113074 HOXC11 JASPAR yes 6490406
chr3 149113063 149113074 HOXC12 JASPAR yes 6490407
chr3 149113063 149113074 HOXD12 JASPAR yes 6490408
chr3 149113064 149113073 CDX1 JASPAR yes 6490409
chr3 149113064 149113074 HOXC10 JASPAR yes 6490410
chr3 149113064 149113074 HOXD11 JASPAR yes 6490411
Genes associated with rs139988345[chr3:149113066], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More