EnhancerDB
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  3. rs139992476[chr19:2527771]
Enhancers that have rs139992476[chr19:2527771]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139992476[chr19:2527771]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2526984 2530255 ZNF143 GTRD no Epithelial (MCF-7) 21836208
chr19 2526984 2530255 ZNF143 GTRD no Epithelial (MCF-7) 108361202
chr19 2526984 2530255 ZNF143 GTRD no Epithelial (MCF-7) 108361203
chr19 2527095 2530280 ZNF143 GTRD no Epithelial (MCF-7) 21836209
chr19 2527095 2530280 ZNF143 GTRD no Epithelial (MCF-7) 108361204
chr19 2527095 2530280 ZNF143 GTRD no Epithelial (MCF-7) 108361205
chr19 2527758 2527775 BCL6B JASPAR yes 112069517
chr19 2527759 2527774 STAT1 JASPAR yes 112069518
chr19 2527761 2527772 STAT1 JASPAR yes 112069519
chr19 2527761 2527772 STAT3 JASPAR yes 112069520
chr19 2527766 2527777 NFKB1 JASPAR yes 112069521
chr19 2527767 2527777 NFKB1 JASPAR yes 112069522
chr19 2527767 2527777 RELA JASPAR yes 112069523
chr19 2527767 2527777 REL JASPAR yes 112069524
chr19 2527767 2527778 NFKB1 JASPAR yes 112069525
chr19 2527769 2527789 RREB1 JASPAR yes 112069526
chr19 2527770 2527780 ZNF740 JASPAR yes 112069527
chr19 2527771 2527781 SP1 JASPAR yes 112069528
chr19 2527771 2527781 ZNF740 JASPAR yes 112069529
chr19 2527771 2527791 RREB1 JASPAR yes 112069530
Genes associated with rs139992476[chr19:2527771], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More