EnhancerDB
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  3. rs140000895[chr12:50933172]
Enhancers that have rs140000895[chr12:50933172]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs140000895[chr12:50933172]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50931879 50935788 ZNF274 GTRD no Bone Marrow (K562) 21545238
chr12 50931879 50935788 ZNF274 GTRD no Bone Marrow (K562) 108031422
chr12 50932270 50935799 ZNF274 GTRD no Liver (HepG2) 21545241
chr12 50932270 50935799 ZNF274 GTRD no Liver (HepG2) 108031425
chr12 50932417 50935869 ZNF274 GTRD no Liver (HepG2) 21545243
chr12 50932417 50935869 ZNF274 GTRD no Liver (HepG2) 108031427
chr12 50933167 50933172 SP1 TRANSFAC yes 120840559
chr12 50933168 50933173 SP1 TRANSFAC yes 120840560
chr12 50933171 50933184 NFKB1 JASPAR yes 120840561
Genes associated with rs140000895[chr12:50933172], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More