EnhancerDB
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  3. rs140053641[chr17:38777102]
Enhancers that have rs140053641[chr17:38777102]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38750565 38781175 enh17142
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs140053641[chr17:38777102]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38777095 38777107 PKNOX1 JASPAR yes 54233286
chr17 38777095 38777107 PKNOX2 JASPAR yes 54233287
chr17 38777095 38777107 TGIF1 JASPAR yes 54233288
chr17 38777095 38777107 TGIF2 JASPAR yes 54233289
chr17 38777096 38777106 HEY2 JASPAR yes 54233290
chr17 38777096 38777106 ID4 JASPAR yes 54233291
chr17 38777096 38777106 TCF4 JASPAR yes 54233292
chr17 38777097 38777106 SNAI2 JASPAR yes 54233293
chr17 38777098 38777103 USF2 TRANSFAC yes 54233294
chr17 38777100 38777108 MEIS3 JASPAR yes 54233295
chr17 38777101 38777105 NFE TRANSFAC yes 54233296
chr17 38777102 38777113 USF2 JASPAR yes 54233297
Genes associated with rs140053641[chr17:38777102], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More