EnhancerDB
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  3. rs140079061[chr17:76346592]
Enhancers that have rs140079061[chr17:76346592]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76316725 76355075 enh17407
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140079061[chr17:76346592]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76345209 76346658 ZNF274 GTRD no Liver (HepG2) 21793631
chr17 76345209 76346658 ZNF274 GTRD no Liver (HepG2) 108302099
chr17 76346349 76346673 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21793675
chr17 76346349 76346673 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108302112
chr17 76346425 76346865 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21793676
chr17 76346425 76346865 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108302113
chr17 76346541 76346831 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21793677
chr17 76346590 76346607 RXRA JASPAR yes 56151228
Genes associated with rs140079061[chr17:76346592], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More