EnhancerDB
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  3. rs140082817[chr17:62692358]
Enhancers that have rs140082817[chr17:62692358]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62688405 62713087 enh17300
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140082817[chr17:62692358]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62687810 62695569 ZNF143 GTRD no Epithelial (MCF-7) 21778961
chr17 62687873 62694535 ZNF143 GTRD no Epithelial (MCF-7) 21778963
chr17 62687878 62695454 ZNF143 GTRD no Epithelial (MCF-7) 21778964
chr17 62687993 62695445 ZNF143 GTRD no Epithelial (MCF-7) 21778965
chr17 62689960 62695593 ZNF143 GTRD no Epithelial (MCF-7) 21778989
chr17 62691436 62695658 ZNF143 GTRD no Epithelial (MCF-7) 21779049
chr17 62691478 62695289 ZNF143 GTRD no Epithelial (MCF-7) 21779050
chr17 62691574 62692544 ZNF143 GTRD no Epithelial (MCF-7) 21779051
chr17 62691589 62695477 ZNF143 GTRD no Epithelial (MCF-7) 21779052
chr17 62691662 62695522 ZNF143 GTRD no Epithelial (MCF-7) 21779053
chr17 62691705 62694235 TCF7L2 GTRD no Colon (HCT116) 21779054
chr17 62691783 62692720 ZNF274 GTRD no Bone Marrow (K562) 21779056
chr17 62691797 62693602 TCF7L2 GTRD no Colon (HCT116) 21779057
chr17 62691852 62694569 ZNF143 GTRD no Epithelial (MCF-7) 21779058
chr17 62691938 62692722 ZNF274 GTRD no Bone Marrow (K562) 21779063
chr17 62692031 62693573 TCF7L2 GTRD no Colon (HCT116) 21779064
chr17 62692041 62692919 TCF7L2 GTRD no Colon (HCT116) 21779065
chr17 62692056 62693479 TCF7L2 GTRD no Colon (HCT116) 21779066
chr17 62692087 62694120 ZNF143 GTRD no Epithelial (MCF-7) 21779067
chr17 62692091 62693495 ZNF274 GTRD no Bone Marrow (K562) 21779068
chr17 62692201 62693526 TCF7L2 GTRD no Colon (HCT116) 21779069
chr17 62692202 62693479 TCF7L2 GTRD no Colon (HCT116) 21779070
chr17 62692355 62692368 NR2F1 JASPAR yes 55312870
Genes associated with rs140082817[chr17:62692358], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More