EnhancerDB
  1. Home
  2. SNP
  3. rs140127953[chr17:65498112]
Enhancers that have rs140127953[chr17:65498112]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65492714 65528744 enh17323
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Astrocyte Bone (Osteoblast) Lung (A549) Blood (GM12878) Stomach Placenta Colon (HCT116) Uterus Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs140127953[chr17:65498112]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65498102 65498113 HOXC13 JASPAR yes 55512600
chr17 65498109 65498119 GSC2 JASPAR yes 55512602
chr17 65498110 65498118 OTX1 JASPAR yes 55512603
chr17 65498110 65498118 OTX2 JASPAR yes 55512604
Genes associated with rs140127953[chr17:65498112], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More