EnhancerDB
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  3. rs140174495[chr19:13140394]
Enhancers that have rs140174495[chr19:13140394]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13138760 13157647 enh17929
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140174495[chr19:13140394]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13139579 13141042 TCF7L2 GTRD no Colon (HCT116) 21850169
chr19 13139579 13141042 TCF7L2 GTRD no Colon (HCT116) 108387482
chr19 13139783 13141220 TCF7L2 GTRD no Colon (HCT116) 21850170
chr19 13139783 13141220 TCF7L2 GTRD no Colon (HCT116) 108387483
chr19 13139832 13141115 TCF7L2 GTRD no Colon (HCT116) 21850171
chr19 13139832 13141115 TCF7L2 GTRD no Colon (HCT116) 108387484
chr19 13140132 13140840 TCF7L2 GTRD no Colon (HCT116) 21850172
chr19 13140132 13140840 TCF7L2 GTRD no Colon (HCT116) 108387485
chr19 13140384 13140399 RUNX2 JASPAR yes 112502475
chr19 13140392 13140402 RELA JASPAR yes 112502476
chr19 13140392 13140402 REL JASPAR yes 112502477
chr19 13140392 13140403 NFKB1 JASPAR yes 112502478
Genes associated with rs140174495[chr19:13140394], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More