EnhancerDB
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  3. rs140179453[chr1:178630122]
Enhancers that have rs140179453[chr1:178630122]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178606845 178636895 enh759
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs140179453[chr1:178630122]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178629578 178630197 ZNF143 GTRD no Epithelial (MCF-7) 21352864
chr1 178629589 178630241 ZNF143 GTRD no Epithelial (MCF-7) 21352865
chr1 178630120 178630135 SOX21 JASPAR yes 33435256
chr1 178630120 178630136 SOX4 JASPAR yes 33435257
Genes associated with rs140179453[chr1:178630122], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More