EnhancerDB
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  3. rs140198654[chr16:87887160]
Enhancers that have rs140198654[chr16:87887160]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87873744 87902035 enh4182
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs140198654[chr16:87887160]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221259
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221260
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221261
chr16 87886986 87888750 ZNF274 GTRD no Liver (HepG2) 21735201
chr16 87886986 87888750 ZNF274 GTRD no Liver (HepG2) 108221270
chr16 87887151 87887166 TFAP2A JASPAR yes 12247389
chr16 87887151 87887166 TFAP2C JASPAR yes 12247390
chr16 87887154 87887166 TFAP2B JASPAR yes 12247391
chr16 87887154 87887166 TFAP2C JASPAR yes 12247392
chr16 87887160 87887177 RARA JASPAR yes 12247393
Genes associated with rs140198654[chr16:87887160], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More