EnhancerDB
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  3. rs140227393[chr18:55467829]
Enhancers that have rs140227393[chr18:55467829]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55430385 55468195 enh17731
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140227393[chr18:55467829]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55467824 55467836 PBX1 JASPAR yes 110888215
chr18 55467828 55467839 PHOX2A JASPAR yes 110888216
chr18 55467829 55467850 IRF1 JASPAR yes 110888217
Genes associated with rs140227393[chr18:55467829], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More