EnhancerDB
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  3. rs140248406[chr19:2549577]
Enhancers that have rs140248406[chr19:2549577]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140248406[chr19:2549577]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2549112 2549647 TCF7L2 GTRD no Colon (HCT116) 21837092
chr19 2549112 2549647 TCF7L2 GTRD no Colon (HCT116) 108362401
chr19 2549419 2550424 ZNF274 GTRD no Blood (GM12878) 108362402
chr19 2549460 2549709 ZNF274 GTRD no Bone Marrow (K562) 21837093
chr19 2549460 2549709 ZNF274 GTRD no Bone Marrow (K562) 108362403
chr19 2549494 2550157 ZBTB33 GTRD no Brain (SK-N-SH) 21837094
chr19 2549494 2550157 ZBTB33 GTRD no Brain (SK-N-SH) 108362404
chr19 2549566 2549577 FOSL2 JASPAR yes 112073242
chr19 2549569 2549979 ZNF143 GTRD no Epithelial (MCF-7) 21837095
chr19 2549569 2549979 ZNF143 GTRD no Epithelial (MCF-7) 108362405
chr19 2549577 2550159 TEF1 GTRD no Bone (Osteoblast) 21837096
chr19 2549577 2550159 TEF1 GTRD no Bone (Osteoblast) 108362406
Genes associated with rs140248406[chr19:2549577], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More