EnhancerDB
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  3. rs140262004[chr17:57922402]
Enhancers that have rs140262004[chr17:57922402]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57915645 57936791 enh17263
Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140262004[chr17:57922402]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57914548 57924655 POLR2A UCSC Txn Factor no Conserved 107688742
chr17 57914548 57924655 POLR2A UCSC Txn Factor no Conserved 108278238
chr17 57915107 57924168 ZNF143 GTRD no Epithelial (MCF-7) 21776393
chr17 57915107 57924168 ZNF143 GTRD no Epithelial (MCF-7) 107688870
chr17 57915107 57924168 ZNF143 GTRD no Epithelial (MCF-7) 108278239
chr17 57919863 57923596 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108278240
chr17 57921518 57924282 ZNF143 GTRD no Epithelial (MCF-7) 21776633
chr17 57921518 57924282 ZNF143 GTRD no Epithelial (MCF-7) 108278241
chr17 57921634 57923038 ZNF143 GTRD no Epithelial (MCF-7) 21776634
chr17 57921634 57923038 ZNF143 GTRD no Epithelial (MCF-7) 108278242
chr17 57921664 57922823 ZNF143 GTRD no Epithelial (MCF-7) 21776636
chr17 57921924 57922801 ZNF143 GTRD no Epithelial (MCF-7) 21776640
chr17 57921970 57922863 ZNF143 GTRD no Epithelial (MCF-7) 21776641
chr17 57921981 57922845 ZNF143 GTRD no Epithelial (MCF-7) 21776643
chr17 57922013 57924044 ZBTB33 GTRD no Lung (A549) 108278243
chr17 57922037 57922889 ZNF143 GTRD no Epithelial (MCF-7) 21776644
chr17 57922048 57922479 ZNF143 GTRD no Epithelial (MCF-7) 21776645
chr17 57922061 57922415 ZNF274 GTRD no Liver (HepG2) 21776646
chr17 57922074 57922875 ZNF143 GTRD no Epithelial (MCF-7) 21776647
chr17 57922160 57922516 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776648
chr17 57922276 57922586 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776649
chr17 57922303 57922567 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776650
chr17 57922393 57922403 POU6F2 JASPAR yes 55088068
Genes associated with rs140262004[chr17:57922402], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More