EnhancerDB
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  3. rs140296260[chr5:90596603]
Enhancers that have rs140296260[chr5:90596603]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90595425 90613326 enh22427
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140296260[chr5:90596603]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90596590 90596605 SCRT1 JASPAR yes 64189798
chr5 90596594 90596603 SNAI2 JASPAR yes 64189799
chr5 90596594 90596604 ID4 JASPAR yes 64189800
chr5 90596594 90596604 TCF3 JASPAR yes 64189801
chr5 90596594 90596604 TCF4 JASPAR yes 64189802
chr5 90596596 90596605 ZEB1 JASPAR yes 64189803
Genes associated with rs140296260[chr5:90596603], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More