EnhancerDB
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  3. rs140329959[chr1:226992019]
Enhancers that have rs140329959[chr1:226992019]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226990625 227018206 enh975
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140329959[chr1:226992019]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226991819 226992232 TCF7L2 GTRD no Colon (HCT116) 21387523
chr1 226992003 226992649 ZNF274 GTRD no Bone Marrow (K562) 21387524
chr1 226992014 226992024 TBR1 JASPAR yes 35845810
chr1 226992014 226992034 TBX19 JASPAR yes 35845811
chr1 226992016 226992025 ZEB1 JASPAR yes 35845812
chr1 226992016 226992032 T JASPAR yes 35845813
chr1 226992019 226992024 USF2 TRANSFAC yes 35845814
Genes associated with rs140329959[chr1:226992019], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More